Public SmartTables Directory

Welcome to SmartTables

A SmartTable is a collection of BioCyc objects, such as genes or metabolites, together with associated data, that can be created, edited, manipulated, and shared on the web.

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	SmartTable	Description	Organism	Type	Size	Owner	Update Time
1	Drug-efflux transporters represented in EcoCyc and their reactions		Escherichia coli K-12 substr. MG1655	complexes, proteins	25	Amanda Mackie	Wed Mar 03 2021 06:46 pm
2	Putative inner membrane transporters		Escherichia coli K-12 substr. MG1655	all-genes	153	Amanda Mackie	Wed Mar 03 2021 06:43 pm
3	Filtered rows from All proteins (polypeptides + protein complexes) of F. prausnitzii A2-165		Faecalibacterium prausnitzii A2-165	dna-segments	30	Suzanne Paley	Tue Mar 02 2021 03:59 pm
4	all pathways whose name contains the string "Stickland"		MetaCyc	string	15	Laima Lukoseviciute	Sat Feb 20 2021 01:04 pm
5	Locations, Knockout-status, All genes of S. enterica enterica serovar Typhimurium str. LT2		Salmonella enterica enterica serovar Typhimurium str. LT2	all-genes	4714	Tatsuya Sakaguchi	Tue Feb 16 2021 12:24 am
6	Proteins with frame references in their comments		Synechococcus sp. WH 8102	proteins	186	Suzanne Paley	Mon Feb 15 2021 12:38 am
7	pathways_12m		MetaCyc	pathways	395	Quang Nguyen	Sat Feb 13 2021 06:34 am
8	pathways_6w		MetaCyc	pathways	395	Quang Nguyen	Sat Feb 13 2021 06:27 am
9	Genes from H2O2 time series with \|TP7\| >1		Escherichia coli K-12 substr. MG1655	all-genes	145	Suzanne Paley	Wed Feb 10 2021 10:01 am
10	all RNAs except rRNAs and tRNAs		Escherichia coli K-12 substr. MG1655	all-genes	93	Scott Saunders	Thu Feb 04 2021 01:16 pm
11	Alignment Example	Simple set of organisms for demonstrating multiple sequence alignment.		ocelot-kb	6	Peter Midford	Thu Feb 04 2021 12:07 am
12	Selected rows from All transporters of C. difficile CD196		Clostridioides difficile CD196	proteins	9	Hualiang Pi	Wed Jan 20 2021 01:01 pm
13	All protein complexes of E. coli K-12 substr. MG1655	All protein complexes in EcoCyc, with columns for their components and the corresponding genes.	Escherichia coli K-12 substr. MG1655	proteins, complexes	1136	Suzanne Paley	Thu Jan 07 2021 11:24 am
14	Location, Copy-Number, esentiality, All genes of E. coli K-12 substr. MG1655		Escherichia coli K-12 substr. MG1655	all-genes	4709	Tatsuya Sakaguchi	Mon Jan 04 2021 06:18 pm
15	ontology_All_compounds_MetaCyc		MetaCyc	proteins, compounds	16631	Wiley Barton	Fri Jan 01 2021 09:20 am
16	ontology_All_pathways_MetaCyc		MetaCyc	pathways	3228	Wiley Barton	Fri Jan 01 2021 09:04 am
17	Ontology_all_instances_v1_public		MetaCyc	pathways	3143	Wiley Barton	Tue Dec 29 2020 08:00 am
18	front-door regulatory motifs	Matches all regulatory motifs of the form Cause -> Mediator -> Effect and Cause <- Regulator -> ...	Escherichia coli K-12 substr. MG1655	all-genes	151	Jeremy Zucker	Sat Dec 19 2020 05:11 pm
19	Curated_DNA_binding_transcriptional_regulators		Escherichia coli K-12 substr. MG1655	all-genes	300	Scott Saunders	Thu Dec 10 2020 06:38 pm
20	Gold_standard_transcription_units	Gold standard transcription units / promoters from RegSeq paper.	Escherichia coli K-12 substr. MG1655	promoters	18	Scott Saunders	Fri Dec 04 2020 04:12 pm

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