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Welcome to SmartTables
A SmartTable is a collection of BioCyc objects, such as genes or metabolites, together with associated data, that can be created, edited, manipulated, and shared on the web.[SmartTables Documentation] [Directory of SmartTables Users]
 
SmartTable |
Description | Organism | Type | Size |
Owner |
Update Time | |
|---|---|---|---|---|---|---|---|
| 1 | GSE71562 Anaerobic-Aerobic transition, significant genes only. | This SmartTable is an example generated via the Cellular Dashboard. The RNA-Seq dataset is derived from von Wulffen et al, PMID 27384956, and has been normalized using the TPM approach. Only genes w/ fold-change > +/- 2 and p-value < .05 are included. To view this dataset using the Cellular Dashboard, see https://biocyc.org/dashboard/dashboard.html?st=biocyc17-463-3702945483. | Escherichia coli K-12 substr. MG1655 | all-genes | 643 | Suzanne Paley | 3 days ago 09:45 am |
| 2 | Genes with no Characterization Levels in E. coli K-12 substr. MG1655 | Escherichia coli K-12 substr. MG1655 | all-genes | 206 | Lisa Moore | Mon Jul 22 2024 05:30 pm | |
| 3 | Uncharacterized Genes of E. coli K-12 substr. MG1655 | Escherichia coli K-12 substr. MG1655 | string | 742 | Lisa Moore | Thu Jul 11 2024 10:53 am | |
| 4 | Gene Characterization Levels of E. coli K-12 substr. MG1655 | Escherichia coli K-12 substr. MG1655 | string | 4747 | Lisa Moore | Thu Jul 11 2024 10:17 am | |
| 5 | Expression Ratios | Escherichia coli K-12 substr. MG1655 | all-genes | 4275 | anamika kothari | Wed May 15 2024 11:46 am | |
| 6 | MetaCyc pathways and all their parent classes | MetaCyc | pathways | 3536 | Suzanne Paley | Mon May 13 2024 08:46 am | |
| 7 | UF Treatments Confidence 1.00 | MetaCyc | string | 277 | Joseph James | Thu May 09 2024 08:01 am | |
| 8 | All instances of RNAs in Escherichia coli K-12 substr. MG1655 | Escherichia coli K-12 substr. MG1655 | rrnas, misc-rnas, all-trnas, rnas | 235 | Jeremy Zucker | Tue May 07 2024 12:05 am | |
| 9 | All pathways of S. cerevisiae S288c_withenzymes | Saccharomyces cerevisiae S288c | pathways | 343 | nir cohen | Mon Apr 29 2024 09:42 am | |
| 10 | All polypeptides of E. coli K-12 substr. MG1655 | Escherichia coli K-12 substr. MG1655 | proteins | 4481 | Bob Page | Fri Apr 26 2024 01:01 pm | |
| 11 | Genes of E. coli K-12 substr. MG1655 with TAG stop codon | Escherichia coli K-12 substr. MG1655 | all-genes | 315 | Gabriella Machado | Thu Apr 25 2024 05:30 am | |
| 12 | all reactions that involve the compound cellulose | MetaCyc | reactions | 8 | Albatros bro | Mon Apr 15 2024 01:46 am | |
| 13 | Leaf-related pathways | MetaCyc | reactions, pathways | 109 | Francisca Labisa Morais | Tue Apr 09 2024 01:19 am | |
| 14 | Regulation - transcription factor regulators of gene from All instances of Genes in Escherichia col | Escherichia coli K-12 substr. MG1655 | pseudo-products, proteins | 252 | Jeremy Zucker | Tue Apr 02 2024 11:31 am | |
| 15 | All reactions of MetaCyc | MetaCyc | string | 17918 | John Docter | Fri Mar 08 2024 03:39 pm | |
| 16 | Copy of All reactions of MetaCyc | MetaCyc | string | 17918 | John Docter | Fri Feb 09 2024 09:13 am | |
| 17 | Compounds from Compound from All compounds of Y. lipolytica CLIB122 | Yarrowia lipolytica CLIB122 | compounds | 1497 | Shuo Yan | Mon Jan 22 2024 05:13 am | |
| 18 | BC1_LUNGS_ALL_NEW | Escherichia coli K-12 substr. MG1655 | all-genes | 565 | Ni Made Teriyani | Sun Jan 21 2024 05:55 am | |
| 19 | Filtered rows from All genes of E. coli K-12 substr. MG1655 | Escherichia coli K-12 substr. MG1655 | all-genes | 641 | Bob Page | Mon Jan 08 2024 10:48 am | |
| 20 | 239 STRING from a list | Escherichia coli K-12 substr. MG1655 | pseudo-products, proteins | 239 | Bob Page | Tue Dec 12 2023 11:14 am |
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EcoCyc version 28.0.
